Gene

rab42b

ID
ZDB-GENE-050417-172
Name
RAB42, member RAS oncogene family
Symbol
rab42b Nomenclature History
Previous Names
  • zgc:112009
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have GTPase activity. Predicted to be involved in Rab protein signal transduction and intracellular protein transport. Predicted to localize to endomembrane system. Is expressed in adaxial cell; epidermis; intermediate cell mass of mesoderm; somite; and ventral mesoderm. Orthologous to human RAB42 (RAB42, member RAS oncogene family).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rab42b Human Ortholog
No data available
Associated With rab42b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005225 Small GTP-binding domain
Family IPR001806 Small GTPase
Family IPR050209 Rab GTPases family involved in membrane trafficking
Family IPR050227 Ras-related protein Rab
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length P-loop containing nucleoside triphosphate hydrolase Rab GTPases family involved in membrane trafficking Ras-related protein Rab Small GTPase Small GTP-binding domain
UniProtKB:A0A0R4IAR3 218
UniProtKB:A9JRP1 205
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rab42b-202 (1) Ensembl 1,030 nt
ncRNA rab42b-002 (1) Ensembl 1,306 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations